miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|125369262|gb|EL383774.1|EL383774 GGGATAAACGGACCACCAACAAAACATCCCTCCATCTCTCAATATCATCATCATCATCATCATCTCTCATCTCACGGTTT
GATTTACGTATCGGGGGGATCTTCCGAATCTGCCTGCCAATCTAATCCCTAATTACAGGGAAGATTGAATCTTGGGAATC
TTTCCTCGATCTTCCTTTTTTATCATTTCTATGCTGGCAGGTTCTCTAGATTCTCCACCCAAAATCTTGCTTACAAATAT
CATAGGAGAACGTAAACCAAGATTCTGTTGATAACTGGGCGTTGATTTAGATACCCATTTGTCAATTTGTTGTTTCTTTG
ATGGGTTATATTCTAGAGTCTAATCAGGGGGCTGTTGGTGGTGGTGGAGGGAAATTGGGGTTAAGAAGTTTGGTTAGGAG
GAAAAGGGTTGATTCCATTCATTCAAAGTCATCAGATACAGGCCATCATCAATTGGCCAAGGAATTATCCATTGCTCATC
TCATTGGAATAGGTGTTGGTTCGACGATCGGAGCAGGGGTTTACATTCTTGTGGGTACAGTTGCCCGAGAGCATTCTGGT
CCTGCGCTCGCATTTTCTTTCCTAATAGCAGGGATAGCAGCTGCTCTTTCTGCCTTTTGTTATGCTGAGCTTGCAAGTCG
TTGCCCTTCAGCCGGAAGTGCATATCATTATTCTTATATTTGTGTTGGAGAAGGTCTTGCTTGGATAATTGGATGGGCTC
TAATTTTGGAATATACAATCGGAGGATCTGCAGTCGCTCGTGGCATTTCTCCTAATCTGGCATTGCTTTTCGGAGGTCCA
GATAGTCTGCCAGCAGTTCTTGCACGGCATTCA




Most similar to sp|P30823|CTR1_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P30823|CTR1_RAT High affinity cationic amino acid transporter 1
          Length = 624

 Score =  124 bits (311), Expect = 8e-28
 Identities = 62/117 (52%), Positives = 80/117 (68%)
 Frame = +3

Query: 450 QLAKELSIAHLIGIGVGSTIGAGVYILVGTVAREHSGPALAFSFLIAGIAAALSAFCYAE 629
           +L++ L+   L+ +GVGST+GAGVY+L G VARE++GPA+  SFLIA +A+ L+  CY E
Sbjct: 27  RLSRCLNTYDLVALGVGSTLGAGVYVLAGAVARENAGPAIVISFLIAALASVLAGLCYGE 86

Query: 630 LASRCPSAGSAYHYSYICVGEGLAWIIGWALILEYTIGGSAVARGISPNLALLFGGP 800
             +R P  GSAY YSY+ VGE  A+I GW LIL Y IG S+VAR  S     L G P
Sbjct: 87  FGARVPKTGSAYLYSYVTVGELWAFITGWNLILSYIIGTSSVARAWSATFDELIGKP 143